high-throughput sequencing and data quality control Search Results


sample quality control, library preparation, and high-throughput sequencing protocols  (CeGAT GmbH)
90
CeGAT GmbH sample quality control, library preparation, and high-throughput sequencing protocols
Sample Quality Control, Library Preparation, And High Throughput Sequencing Protocols, supplied by CeGAT GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/high-throughput+sequencing+and+data+quality+control/sample+quality+control++library+preparation++and+high+throughput+sequencing+protocols/pmc10090045-143-6-14
Average 90 stars, based on 1 article reviews
sample quality control, library preparation, and high-throughput sequencing protocols - by Bioz Stars, 2026-08
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high-throughput sequencing and data analysis  (MedGenome)
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MedGenome high-throughput sequencing and data analysis
High Throughput Sequencing And Data Analysis, supplied by MedGenome, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/high-throughput+sequencing+and+data+quality+control/high+throughput+sequencing+and+data+analysis/pm35786700-281-12-3
Average 90 stars, based on 1 article reviews
high-throughput sequencing and data analysis - by Bioz Stars, 2026-08
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rna sequencing (rna-seq) analysis  (Oxford Gene Technology)
90
Oxford Gene Technology rna sequencing (rna-seq) analysis
Differential <t>RNA</t> expression in HSP90i-resistant clones compared to parental Hs578T cells. RNA samples from DMSO-treated and ganetespib-treated Hs578T, CR2 and CR3 cells were analysed for whole transcriptome profiling with <t>RNA-sequencing.</t> Differential gene expression analyses were performed between DMSO-treated parental Hs578T cells with either DMSO-treated CR2 or CR3 and the significantly upregulated genes observed in these clones were mostly overlapping. Pathway enrichment analysis using Metacore™ was performed on the significantly upregulated overlapping genes. The graph represents the top 20 most significantly upregulated pathways in the HSP90i-resistant clones, with FDR (false discovery rate) value < 0.05. Pathways highlighted in blue are linked to JAK-STAT signalling
Rna Sequencing (Rna Seq) Analysis, supplied by Oxford Gene Technology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/high-throughput+sequencing+and+data+quality+control/rna+sequencing++rna+seq++library+preparation++high+throughput+sequencing++and+data+analysis/pmc06345040-76-11-15
Average 90 stars, based on 1 article reviews
rna sequencing (rna-seq) analysis - by Bioz Stars, 2026-08
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Differential RNA expression in HSP90i-resistant clones compared to parental Hs578T cells. RNA samples from DMSO-treated and ganetespib-treated Hs578T, CR2 and CR3 cells were analysed for whole transcriptome profiling with RNA-sequencing. Differential gene expression analyses were performed between DMSO-treated parental Hs578T cells with either DMSO-treated CR2 or CR3 and the significantly upregulated genes observed in these clones were mostly overlapping. Pathway enrichment analysis using Metacore™ was performed on the significantly upregulated overlapping genes. The graph represents the top 20 most significantly upregulated pathways in the HSP90i-resistant clones, with FDR (false discovery rate) value < 0.05. Pathways highlighted in blue are linked to JAK-STAT signalling

Journal: BMC Cancer

Article Title: Overcoming acquired resistance to HSP90 inhibition by targeting JAK-STAT signalling in triple-negative breast cancer

doi: 10.1186/s12885-019-5295-z

Figure Lengend Snippet: Differential RNA expression in HSP90i-resistant clones compared to parental Hs578T cells. RNA samples from DMSO-treated and ganetespib-treated Hs578T, CR2 and CR3 cells were analysed for whole transcriptome profiling with RNA-sequencing. Differential gene expression analyses were performed between DMSO-treated parental Hs578T cells with either DMSO-treated CR2 or CR3 and the significantly upregulated genes observed in these clones were mostly overlapping. Pathway enrichment analysis using Metacore™ was performed on the significantly upregulated overlapping genes. The graph represents the top 20 most significantly upregulated pathways in the HSP90i-resistant clones, with FDR (false discovery rate) value < 0.05. Pathways highlighted in blue are linked to JAK-STAT signalling

Article Snippet: Duplicate samples (1 μg RNA in 30 μl) were subjected to RNA Sequencing (RNA-seq) analysis (Oxford Gene Technology) and gene expression was quantified using their analysis pipeline [ ].

Techniques: RNA Expression, Clone Assay, RNA Sequencing, Gene Expression